Search results for "catabolite repression"

showing 9 items of 9 documents

Yeast trehalases: Two enzymes, one catalytic mission

2016

Abstract Background Trehalose is a non-reducing disaccharide highly conserved throughout evolution. In yeasts, trehalose hydrolysis is confined to the enzyme trehalase, an α-glucosidase specific for trehalose as sole substrate. Two kinds of trehalase activity exist in yeasts: neutral and acid enzymes. Scope of the review This review makes a comparative survey of the main biochemical and genetic parameters, regulatory systems, tridimensional structure and catalytic mechanism of the two yeast trehalases. Major conclusions The yeast neutral and acid trehalases display sharp differences in biochemical features (optimum pH, Mr or amino acid sequence) physiological roles, subcellular location (cy…

0301 basic medicineCytoplasm030106 microbiologyBiophysicsCatabolite repressionTrehalase activitySaccharomyces cerevisiaeBiologyBiochemistryCatalysis03 medical and health scienceschemistry.chemical_compoundCell WallTrehalaseTrehalaseMolecular BiologyPeptide sequencechemistry.chemical_classificationHydrolysisTrehaloseTrehaloseYeastCytosol030104 developmental biologyEnzymechemistryBiochemistryBiochimica et Biophysica Acta (BBA) - General Subjects
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Requirement of the Lactobacillus casei MaeKR two-component system for L-malic acid utilization via a malic enzyme pathway.

2009

ABSTRACTLactobacillus caseican metabolizel-malic acid via malolactic enzyme (malolactic fermentation [MLF]) or malic enzyme (ME). Whereas utilization ofl-malic acid via MLF does not support growth, the ME pathway enablesL. caseito grow onl-malic acid. In this work, we have identified in the genomes ofL. caseistrains BL23 and ATCC 334 a cluster consisting of two diverging operons,maePEandmaeKR, encoding a putative malate transporter (maeP), an ME (maeE), and a two-component (TC) system belonging to the citrate family (maeKandmaeR). Homologous clusters were identified inEnterococcus faecalis,Streptococcus agalactiae,Streptococcus pyogenes, andStreptococcus uberis. Our results show that ME is …

DNA BacterialLactobacillus caseiHistidine KinaseMalic enzymeCatabolite repressionDNA FootprintingMalatesGenetics and Molecular Biologymedicine.disease_causeApplied Microbiology and Biotechnologychemistry.chemical_compoundBacterial ProteinsOperonmedicineEnterococcus faecalisDirect repeatPromoter Regions Geneticchemistry.chemical_classificationEcologybiologySequence Homology Amino AcidGene Expression Profilingfungifood and beveragesStreptococcusGene Expression Regulation Bacterialbiology.organism_classificationMolecular biologyAmino acidResponse regulatorLacticaseibacillus caseichemistryBiochemistryMultigene FamilyStreptococcus pyogenesMalic acidProtein KinasesMetabolic Networks and PathwaysFood ScienceBiotechnologyProtein BindingSignal TransductionTranscription FactorsApplied and environmental microbiology
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Non-Saccharomyces Yeasts nitrogen source preferences: Impact on sequential fermentation and wine volatile compounds profile

2017

International audience; Nitrogen sources in the must are important for yeast metabolism, growth, and performance, and wine volatile compounds profile. Yeast assimilable nitrogen (YAN) deficiencies in grape must are one of the main causes of stuck and sluggish fermentation. The nitrogen requirement of Saccharomyces cerevisiae metabolism has been described in detail. However, the YAN preferences of non-Saccharomyces yeasts remain unknown despite their increasingly widespread use in winemaking. Furthermore, the impact of nitrogen consumption by non-Saccharomyces yeasts on YAN availability, alcoholic performance and volatile compounds production by S. cerevisiae in sequential fermentation has b…

Effect of nitrogen on plantsaroma compoundsEfecte del nitrògen sobre les plantesSaccharomycetaceaeco-fermentation[ SDV.IDA ] Life Sciences [q-bio]/Food engineeringlcsh:QR1-502Winechardonnay winesnon-Saccharomyces yeastsyeast interactionslcsh:Microbiologysauvignon blancalcoholic fermentationnitrogen sources[SDV.IDA]Life Sciences [q-bio]/Food engineeringamino-acidViSacaromicetàciesvolatile compoundswineassimilable nitrogencerevisiaecatabolite repressiongrape juice
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Cloning and characterization of PRB1, a Candida albicans gene encoding a putative novel endoprotease B and factors affecting its expression

2002

Abstract Several cDNA fragments corresponding to transcripts differentially expressed under conditions that favor mycelial growth of Candida albicans were identified by the “differential display” technique. One of these was cloned and used as a probe to rescue the full gene from a genomic library of the fungus. The sequence identified a single, uninterrupted open reading frame of 1395 nucleotides encoding a putative protein of 465 residues and a theoretical molecular weight of 50.3 kDa, present in the genome as a single copy located at chromosome 2 in different strains. The gene product showed high homology with subtilisin-like proteases, mainly PRB1, the vacuolar B protease from Saccharomy…

Molecular Sequence DataMutantCatabolite repressionMicrobiologyFungal ProteinsGene productGene Expression Regulation FungalComplementary DNACandida albicansHumansAmino Acid SequenceCloning MolecularDNA FungalCandida albicansMolecular BiologyGeneGene LibraryDifferential displayBase SequencebiologyGene Expression ProfilingSerine EndopeptidasesSequence Analysis DNAGeneral Medicinebiology.organism_classificationMolecular biologyElectrophoresis Gel Pulsed-FieldBlotting SouthernOpen reading frameBiochemistryMutagenesisChromosomes FungalSequence AlignmentResearch in Microbiology
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Fumarate dependent protein composition under aerobic and anaerobic growth conditions in Escherichia coli

2020

Abstract In the absence of sugars, C4-dicarboxylates (C4DC) like fumarate represent important substrates for growth of Escherichia coli. Aerobically, C4DCs are oxidized to CO2 whereas anaerobically, C4DCs are used for fumarate respiration. In order to determine the impact of fumarate under aerobic and anaerobic conditions, proteomes of E. coli W3110 grown aerobically or anaerobically with fumarate and/or the non-C4DC substrate glycerol were comparatively profiled by nanoLC-MS/MS. Membrane enrichment allowed sensitive detection of membrane proteins. A total of 1657 proteins of which 646 and 374 were assigned to the cytosol or membrane, respectively, were covered. Presence of fumarate trigger…

Proteomics0301 basic medicineBiophysicsCatabolite repressionmedicine.disease_causeBiochemistryCarbon utilization03 medical and health sciencesFumaratesTandem Mass SpectrometryEscherichia colimedicineDicarboxylic AcidsAnaerobiosisEscherichia coli030102 biochemistry & molecular biologybiologyChemistryEscherichia coli ProteinsGene Expression Regulation BacterialAerobiosisDNA-Binding ProteinsCitric acid cycle030104 developmental biologyRegulonMembrane proteinBiochemistrycAMP receptor proteinbiology.proteinProtein KinasesAnaerobic exerciseTranscription FactorsJournal of Proteomics
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Partial purification and characterization of succinyl-CoA synthetase from Saccharomyces cerevisiae

1983

Succinyl-CoA synthetase from Saccharomyces cerevisiae was partially purified (20-fold) with a yield of 44%. The Michaelis-Menten constants were determined: Km (succinate) = 17 mM; Km (ATP) = 0.13 mM; Km (CoA) = 0.03 mM. The succinyl-CoA synthetase has a molecular weight of about 80000 dalton (as determined by polyacrylamide gradient gel electrophoresis). The pH optimum is at 6.0. During fermentation the activity of succinyl-CoA synthetase is lower than in aerobically grown yeast cells. The presence of succinyl-CoA synthetase in fermenting yeasts may be regarded as an indication for the oxidative formation of succinate. In fermenting yeast cells succinyl-CoA synthetase is repressed by glucos…

Saccharomyces cerevisiaeSuccinic AcidCatabolite repressionSaccharomyces cerevisiaeMicrobiologyAdenosine TriphosphateCoenzyme A LigasesSuccinate-CoA LigasesAnaerobiosisMolecular BiologyGel electrophoresischemistry.chemical_classificationChromatographybiologyorganic chemicalsSuccinyl coenzyme A synthetaseTemperatureSuccinatesSuccinate-CoA LigasesGeneral MedicineHydrogen-Ion Concentrationbiology.organism_classificationYeastAmino acidMolecular WeightKineticsBiochemistrychemistrybacteriaFermentationAntonie van Leeuwenhoek
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Glucose uptake in germinating Aspergillus nidulans conidia: involvement of the creA and sorA genes

2003

d-Glucose uptake in germinating wild-typeAspergillus nidulansconidia is an energy-requiring process mediated by at least two transport systems of differing affinities for glucose: a low-affinity system (Km∼1·4 mM) and a high-affinity system (Km∼16 μM). The low-affinity system is inducible by glucose; the high-affinity system is subject to glucose repression effected by the carbon catabolite repressor CreA and is absent insorA3mutant conidia, which exhibit resistance tol-sorbose toxicity. An intermediate-affinity system (Km∼400 μM) is present insorA3conidia germinating in derepressing conditions.creAderepressed mutants show enhanced sensitivity tol-sorbose. The high-affinity uptake system ap…

biologyGlucose uptakeGenes FungalMutantFungal geneticsCatabolite repressionBiological Transport ActiveRepressorCarbohydrate metabolismbiology.organism_classificationMicrobiologyAspergillus nidulansConidiumFungal ProteinsRepressor ProteinsKineticsGlucoseBiochemistryDrug Resistance FungalAspergillus nidulansMutationSorboseMicrobiology
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Impact of Starmerella bacillaris and Zygosaccharomyces bailii on ethanol reduction and Saccharomyces cerevisiae metabolism during mixed wine fermenta…

2021

AbstractThe bulk of grape juice fermentation is carried out by the yeast Saccharomyces cerevisiae, but non-Saccharomyces yeasts can modulate many sensorial aspects of the final products in ways not well understood. In this study, some of such non-conventional yeasts were screened as mixed starter cultures in a fermentation defined medium in both simultaneous and sequential inoculations. One strain of Starmerella bacillaris and another of Zygosaccharomyces bailii were chosen by their distinct phenotypic footprint and their ability to reduce ethanol levels at the end of fermentation, particularly during simultaneous vinification. S. bacillaris losses viability strongly at the end of mixed fer…

chemistry.chemical_compoundBiochemistrychemistrybiologyZygosaccharomyces bailiiSaccharomyces cerevisiaeCatabolite repressionGlycolysisFermentationMetabolismbiology.organism_classificationTrehaloseYeast
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Differential Translational Efficiency of the mRNAs Isolated from Derepressed and Glucose Repressed Saccharomyces cerevisiae

1987

Summary: Carbon catabolite derepression induced changes in the pool of yeast mRNAs translatable in a protein-synthesizing reticulocyte system. Competition experiments with globin mRNA showed that the mRNA population obtained from derepressed cells possessed a higher translational efficiency than mRNA from repressed cells. The mRNAs that could account for the high translational efficiency of the derepressed mRNA were not detected in cells growing in glucose-rich medium. Analysis of protein synthesis in the presence of 7-methylguanosine 5′-phosphate indicated that the initiation factors recognizing the 5′-terminal structure of capped messengers interacted with lower affinity with the represse…

education.field_of_studyTranslational efficiencyfungiPopulationSaccharomyces cerevisiaeCatabolite repressionRNA FungalSaccharomyces cerevisiaeBiologybiology.organism_classificationMicrobiologyFungal ProteinsKineticsGlucosemedicine.anatomical_structureReticulocyteBiochemistryProtein BiosynthesismedicineProtein biosynthesisInitiation factorRNA MessengerEnzyme RepressioneducationDerepressionMicrobiology
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